BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F12SP1|AL425910
(780 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig294 1138 0.0
>3x_Contig294
Length = 2887
Score = 1138 bits (563), Expect = 0.0
Identities = 604/632 (95%)
Strand = Plus / Minus
Query: 137 cttccaggtgtttatgttcttaatatatggcaggcagcatcaataatatcaaagcyagtc 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1116 cttccaggtgtttatgttcttaatatatggcaggcagcatcaataatatcaaagctagtc 1057
Query: 197 cattcctcattgggctcaattatcgatgtcgatactggtcatgaagtttatcaagatgcy 256
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 cattcctcattgggctcaattatcgatgtcgatactggtcatgaagtttatcaagatgct 997
Query: 257 gtatcattaayyycgaatgcctctgtcctcaagtacgatatggcttatagaycagctggt 316
|||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 996 gtatcattaatttcgaatgcttctgtcctcaagtacgatatggcttatagatcagctggt 937
Query: 317 atcatgagaagtatatggagcatgtccagcaacatgttcgaagagtggaaagcgaagaaa 376
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 936 attatgagaagtatatggagcatgttcagcaacatgttcgaagagtggaaagcgaagaaa 877
Query: 377 gaccaaagttcctcttcaacacagtcagaaaaggattttmacttgagtattaccataaga 436
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 876 gaccaaagttcctcttcaacacagtcagaaaaggattttaacttgagtattaccataaga 817
Query: 437 ccyagaatgtctgtsagtgttttctttgactgcytgttcatattaagacagaagtgcggt 496
| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 816 tctagaatgtctgtgagtgttttctttgactgcttgttcatattaagacagaagtgcggt 757
Query: 497 atggcaaaaccaaagagagaaagagaaaagacagtcncctctgatgatgaaaatagtggc 556
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 756 atggcaaaactaaagagagaaagagaaaagacagtctcctctgatgatgaaaatagtggc 697
Query: 557 gataaccataacggagatgcagagtccaaagaactaccgcccaacgatgggtattccgaa 616
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 696 gataaccataacggagatgcagagtccaaagaactactgcccaacgatgggtattccgaa 637
Query: 617 gaacatgccakawggattatatctwcyattccacttkwcccakagcccatcaatkcacak 676
|||||||||| | ||||||||||| | ||||||||| |||| ||||||||||| ||||
Sbjct: 636 gaacatgccagaaggattatatctaccattccacttgacccagagcccatcaatgcacag 577
Query: 677 cagtccaktgkaagcaatattacatctccgaacggttcacatagtagtgacgttttgtca 736
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cagtccagtggaagcaatattacatctccgaacggttcacatagtagtgacgttttgtca 517
Query: 737 ttgaaatcaatcctaaacaaaacgtccccaaa 768
||||||||||||||||||||||||||||||||
Sbjct: 516 ttgaaatcaatcctaaacaaaacgtccccaaa 485
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4125
Number of Sequences: 1807
Number of extensions: 4125
Number of successful extensions: 107
Number of sequences better than 1.0e-20: 1
length of query: 780
length of database: 10,358,551
effective HSP length: 16
effective length of query: 764
effective length of database: 10,329,639
effective search space: 7891844196
effective search space used: 7891844196
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.6 bits)